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Package index
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aggregate_and_extract_gamma()
- Aggregate Individual Survey Data and Extract Gamma Parameters by Location
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compute_cov()
- Compute Covariance Matrix for Spatial Model
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create_prediction_data()
- Generate or Load Cached Predictors Data
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create_project_structure()
- Create a Standardized Project Folder Structure
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download_dhs_datasets()
- Main Function to Download DHS Datasets
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download_pop_rasters()
- Download population rasters for given country codes.
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download_shapefile()
- Download WHO ADM2 Boundaries with Partial Update
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extract_afurextent()
- Extract Urban/Rural Extent Raster
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extract_age_param()
- Extract Parameters and Optimization Details with Log-Likelihood
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extract_betas()
- Extract Beta Parameters from Model Output
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fit_spatial_model()
- Fit a Spatial Model for Age Parameters using TMB
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generate_age_pop_raster()
- Generate Age Population Raster
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generate_age_pop_table()
- Generate Age Population Tables
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generate_age_pyramid_plot()
- Generate and Save Age Pyramid Plot
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generate_gamma_predictions()
- Predict Gamma Distribution Parameters for Spatial Grid
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generate_gamma_raster_plot()
- Generate and Save Raster Plot for Gamma Predictions
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generate_variogram_plot()
- Generate Variogram Plot
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init()
- Initialize Full Pipeline Script and Model Script
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log_lik()
- Log-Likelihood Function for Spatial Model
-
process_dhs_data()
- Process DHS Data: Merge RDS Files with Shapefiles and Extract Gamma Parameters
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process_final_population_data()
- Process Final Population Data
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process_gamma_predictions()
- Process Gamma Prediction Results
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rasterize_data()
- Rasterize Spatial Data
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run_full_workflow()
- Run Country-Specific Spatial Modeling Workflow with Logging